The coral reefs of the world have taken a lot of abuse lately. As the planet heats up, a 2017 study found that record high temperatures led to the death of roughly one-third of the corals in Australia’s Great Barrier Reef. Similarly, a 2005 assessment found that after being hit by a heat wave and a series of hurricanes, 90 percent of corals in the US Virgin Islands died. And a 2019 United Nations report predicts that 70 to 90 percent of the corals on Earth will perish if the global temperature rises by 1.5 degrees Celsius, the limit mandated by the Paris Agreement.

But in the Gulf of Aqaba, a bay on the Red Sea bordered by Israel, Jordan, Egypt, and Saudi Arabia, a fluke of evolution and genetics gives scientists the smallest glimmer of hope. A coral species called Stylophora pistillata is able to withstand temperature fluctuations as much as 5 degrees Celsius higher than its normal environment, far higher than what even the most dire global warming projections predict for this century. S. pistillata seems to be able to turn particular genes on and off, and scientists speculate this might help them adjust their cellular functions to accommodate a warmer environment. Their genetic secrets could help scientists understand how to help other coral species. Or, by protecting this special area, they could use this coral to reseed reefs that haven’t survived.

The coral is a “gift of nature,” says Anders Meibom, a professor of biological geochemistry at the École Polytechnique Fédérale de Lausanne. “Humanity has done nothing to deserve this, but we have it.”

In a paper published this month in the Proceedings of the National Academy of Sciences, Meibom and his colleagues investigated how this coral withstands such intense heat, when most can only survive within a degree or so of their normal range. The researchers saw that not only does the coral change its gene expression in response to extreme heat, but so do the algae and bacteria that live on it. “In this study, we are looking in a broad sense both at the coral and its symbiotic partners,” Meibom says. “When you begin to stress them, what is the genetic machinery that is kicking in?”

Coral is made up of tiny organisms called polyps, which cluster together and form reefs. These ultimately become home to a diverse ecosystem of marine animals and plants, all working together to sustain life. Algae performs photosynthesis, turning the sun’s rays into sugar that helps the coral live and grow. (These algae also give the coral their brilliant color.) Fish keep the algae pruned and prevent it from overtaking the coral. And symbiotic bacteria inhabit the coral the way gut bacteria inhabit the human digestive tract, contributing to the overall well-being of their environment.

But when water temperatures rise, the coral ejects the algae, possibly because it responds to the heat by releasing chemicals that damage its host’s tissues. This process is known as bleaching because, without the algae, the coral’s natural white color is revealed. Corals can survive the event, but they are left in a starved and weakened state. If water temperatures return to normal relatively quickly, the algae can return and reestablish their crucial symbiosis. But the more common these events become, the less likely it is that the coral will recover.

Coral species adapted over decades to the specific ocean niches where each lives, and Meibom thinks some could eventually adapt to higher temperatures—but climate change is outpacing evolution. “The problem is that everything is happening so fast,” he says.

To see what defenses coral have already evolved against warmer waters, Meibom and his colleagues wanted to learn just how much heat the corals and their complex network, called a holobiont, could withstand. He likens it to testing the strength of a rubber band: How far can you stretch it before it breaks? And how long does it take to return to its regular shape?

Karine Kleinhaus, who researches corals at Stony Brook University, says it is crucial to understand how these corals operate at the cellular level. "These amazing corals are going to be among the last to survive" to the end of the 21st century, she says. "We need to figure out what they are doing, what’s going on, how they do it.”

In their experiment, the researchers grew S. pistillata in a series of aquaria they dubbed the Red Sea Simulator. Each aquarium could be customized to replicate specific water conditions and to expose the coral, algae, and bacteria to different temperatures for different time periods. Then the researchers examined which genes the coral expressed during their normal state, how that changed as the temperature rose, and how fast that gene activity went back to normal when the temperature was reduced.

They found that all three organisms were all able to change which genes they used as the water warmed up. The coral, for example, turned up the use of genes that are involved in unfolded protein response, a mechanism that is used to detect environmental stress and preserve homeostasis in the cell; in other studies, it’s been described as corals’ first line of defense against heat. Meanwhile, the algae turned down the activation of genes related to photosynthesis. Overall, the Red Sea species were able to stay alive until the temperature warmed up by more than 5 degrees C. And once the scientists lowered the temperature in the tanks, the entire holobiont returned to a normal state, even after a week under hot conditions. Meibom likens their resiliency to a super-fit athlete who is able to recover quickly after a big workout and get ready for another challenge.

“The paper is really good work and sheds light on the early stages of heat-stress response in thermally tolerant corals," says Andréa Grottoli, a professor in the School of Earth Sciences at Ohio State University who studies coral and climate change. But she notes that there are some limitations to this approach. Just because the genes are activated doesn’t mean that the coral will ultimately make new proteins. It’s an indicator that the coral is responding to its environment, but it’s not the whole story—you would also want to know exactly which biochemical changes it was making to adapt, and how those physically change the coral.

Grottoli also points out that the longest exposures in the study, up to seven days, are shorter than many real-life heat waves. “Most natural bleaching events are two months long,” she says.

Meibom agrees that his study doesn’t explain how these newly activated genes might help the coral survive, but he says that identifying them is a step toward figuring that out. “It provides a hint for what is going on.”

It’s also unclear why these corals possess this heat resistance but others don’t. It may not be because they evolved in the hot climate of the Red Sea, but because they arrived from someplace even hotter. Meibom theorizes that it may have to do with which species populated the Red Sea during the last ice age, some 20,000 years ago. Water from around the equator evaporated and eventually froze into large glaciers. With all that water trapped in ice, sea levels plummeted, cutting the Red Sea off from the Arabian Sea, essentially turning it into a lake. The water level dropped and salt accumulated, making it an inhospitable environment. But when the glaciers melted and the connection to the rest of the ocean was repaired, new water and life forms flooded in. That included coral living in the Arabian Sea, which had slowly made its way up from hotter southern waters. Only these species that were adapted to heat were healthy enough to send their larvae north to repopulate the Gulf of Aqaba. “They were selected. It’s like a filter,” says Meibom.

Even after thousands of years, he believes, “they still remember in their biology how to live in much, much warmer water than they currently do.”

If we get climate change under control, Red Sea corals might be used to rehabilitate reefs elsewhere that didn’t survive, says Grottoli, but it’s a long shot. “Any time there have been species introductions, historically that has not gone well,” she says. Still, scientists are starting to debate this possibility and investigate whether coral species could be crossbred to become more heat tolerant. At this point, it may be our only choice.